Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYKVADIFCGAGGLSYGFSTHPYFELIWANDIDKDAILSYQANHKETQTILCDIAQLHCHNLPRVPIDILLGGPPCQSYSTLGKR-K-MDEKANLFKEYLRILDLVKPKIFVFENVVGLMSMQKGQLFQRICNAFKERGYILEHAILNALDYGVPQVRERVILVGALKSFKQKF-Y--FPKPIKTHFSLKDALGDLPPIQSGENGDALGYLKNADNVFLEFVRNSK--ELSEHSSPKNNEKLIKIMQTLKDGQSKDDLPESLRPKSGYINTYAKMWWEKPAPTITRNFST----PSS----------SRC--IHPRDSRALSIREGARLQSFPDNYKFYG-SANAKRLQIGNAVPPLLSAALAHAVFDFLRGKNV |
| 3UBT Chain:Y ((1-327)) | -MNLISLFSGAGGLDLGFQK-AGFRIICANEYDKSIWKTYESNHSAK-LIKGDISKISSDE--FPKCDGIIGGPPSQSWSEGGSLRGIDDPRGKLFYEYIRILKQKKPIFFLAENVKGMMAQRHNKAVQEFIQEFDNAGYDVHIILLNANDYGVAQDRKRVFYIGFRK---ELNINYLPPIPHLIKPTFKDVIWDLKDNPIPALD------------K--NKTNGNKCIYPNHEY---------F------IGSY---------STIFMSRNRVRQWNEPAFTVQASGRQCQLHPQAPVMLKVSKNLNKFVEGKEHLYRRLTVRECARVQGFPDDFIFHYESLNDGYKMIGNAVPVNLAYEIAKTIKSALEICK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UBT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -115089 for 2464 contacts (-46.7/contact) +
2D Compatibility (PS) -31775 + (NN) -6954 + (LL) 2296
1D Compatibility (HY) -11600 + (ID) 4900
Total energy: -168022.0 ( -68.19 by residue)
QMean score : 0.385
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