Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIRTPKHLTKQESVNLGAYYTPPYLVDCAYKLLKKHVGIENYTLLDTACGNKEFLKLHH--------------------PKKIGADIDPKCDALIINALA--NP--K-----RENYGI---SQDEPLIIVGNPPYNDRTSFIKQDIKNKDFIFEI---DNDLKSRDLGISFL-KSFAILKPAF-ICVLHPLSYLIKEA-NFKQLK-LFKDHYRLLDAFVVSSKSFTKSNEFPIVIALYERGRMDYAGIRRFVFPTDCDTTLCLNDFDYIANYVDKYPNAKKVGACVGYFFPMRDINALKRNKTFLNAPSENAVRISQDKLIYYQYIHYFKEIAPKIPYYFGNLDIIIDHFAFLEIKDAFLKDKRARLEYFKKLFQGHPCEFD |
| 3KHK Chain:A ((220-448)) | -----------EGKQGGQYYTPKSIVTLIVEMLEPY----KGRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDFNFGKKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNKRILTPPTGNANFAWMLHMLYHLAPTGSMALLLANGSMSSNTNNEGEIRKTLVEQDLVECMVALPGQLFTNTQI-PACIWFLTKDKNAKNGKRDRRGQVLFIDARKLGYMKDRVLRDFKDEDIQKLADTFHNWQQEWSEENNQAGFCFSADLALIRKNDFVLTPGRYVG--------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KHK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -52715 for 1466 contacts (-36.0/contact) +
2D Compatibility (PS) -20295 + (NN) -11938 + (LL) 4552
1D Compatibility (HY) -5200 + (ID) 1350
Total energy: -86946.0 ( -59.31 by residue)
QMean score : 0.387
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