Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLEKQHIQYFKNLVGGEDFFTDLAHLNAYCYDATKERHLPSGVIFPKNEREISQILKYCNEHRLIVVPRGAGSGFTGGALSVS-----GGLVLSVEKHLDKILEIDTKNLIARVEPGVINKHFQNEVEKLDLFYPPDPASE-NQSTLGGNVAENAGGMRAAKYGITK----------------DYVMALRVV---------LANGEIIRAG----K-------------KTIK-DVAGF--NIAGLMI--ASEGCLGVISEITLKLLAKPPLKQSAMGVFNHIEDAMNAVYKTMSS-GVTPVAMEFLDNLSIKAVEERFSKGLPK-------DAGAILITQVDGVVKEQIAWQLNEIEKHFKANGCVGFKIAQNEQEEQDLWFSRRNASQSISVY-------GKKKLNEDVTVPRASLPSLLQEVAKISQKYGFKIPCFGHTGDGNVHVNIMLEDPKRDLEKGHKAMEEIFQAAISLEGTLSGEHGIGLSKAKFMPLAFNHSEMELFRNIKKALDPNNILNPFKMGL |
| 1F0X Chain:A ((9-561)) | --NKAFLNELARLVGSSHLLTDPAKTARYRKGFRSGQGDALAVVFPGSLLELWRVLKACVTADKIILMQAANTGLTEGSTPNGNDYDRDVVIIS-TLRLDKLHVLG-KGEQVLAYPGTTLYSLEKALKPLGREPHSVIGSSCIGASVIGGICNNSGGSLVQRGPAYTEMSLFARINEDGKLTLVNHLGIDLGETPEQILSKLDDDRIKDDDVRHDGRHAHDYDYVHRVRDIEADTPARYNADPDRLFESSGCAGKLAVF-AVRLDTFEAEKNQQVFYIGTNQPEVLTEIRRHILANFENLPVAGEYMHRDIYDIAE------LPPRMKNWRDKYEHHLLLKMAGDGVGEAKS---WLVDYFKQAEGDFFV--CTPEEGSKAFLHRFAAAGAAIRYQAVHSDEVEDILALDIALRRND-TEWYEHLPPEIDSQLVHKLYYGHFMCYVFHQDYIVKKGV---DVH-ALKEQMLELLQQRGAQYPAEHNVGHLYKA----------PETLQKFYRENDPTNSMNPGIGKT |
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General information:
TITO was launched using:
| RESULT:
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Template: 1F0X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -68017 for 3639 contacts (-18.7/contact) +
2D Compatibility (PS) -45882 + (NN) -9658 + (LL) 2476
1D Compatibility (HY) -4400 + (ID) 3800
Total energy: -129281.0 ( -35.53 by residue)
QMean score : 0.362
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