Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPNRGVVLLDGQALAYNIEKDLKNKIQIITAQTHKRPKLAVILVGKDPASITYVNMKIKACQRVGMDFDLKTLKENITEAELLSLIKDYNTDQNISGILVQLPLPRSIDTKMILEAIDPNKDVDGFHPLNIGKLCTQKESFLPATPMGVMRLLEHYHIEIKGKDVAIIGASNIIGKPLSMLMLNAGASVSVCHILTKDISFYTKNADIVCVGVGKPDLIKASMLKKGAVVVDIGINHLNDGRIVGDVDFINAQKIAGFITPVPKGVGPMTIVSLLENTLIAFEKQQRKGF |
4B4V Chain:B ((24-300)) | ------LVLDGRALAKQIEENLLVRVEALKAKTGRTPILATILVGDDGASATYVRMKGNACRRVGMDSLKIELPQETTTEQLLAEIEKLNANPDVHGILLQHPVPAQIDERACFDAISLAKDVDGVTCLGFGRMAMGEAAYGSATPAGIMTILKENNIEIAGKHAVVVGRSAILGKPMAMMLLQANATVTICHSRTQNLPELVKQADIIVGAVGKAELIQKDWIKQGAVVVDAGF-HPRDGGGVGDIQLQGIEEIASAYTPVPGGVGPMTITTLIRQTVEAAEKALG--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4B4V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -229775 for 2425 contacts (-94.8/contact) +
2D Compatibility (PS) -29567 + (NN) -9544 + (LL) 368
1D Compatibility (HY) -21600 + (ID) 6100
Total energy: -296218.0 ( -122.15 by residue)
QMean score : 0.592
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