Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQEIEIFCDGSSLGNPGPGGYAAILRYKDKEKTISGGENFTTNNRMELRALNEALKILKRPCHITLYSDSQYVCQAINVWLVNWQKKNF-----AKVKNVDLWKEFVKVSKGHSIVAVWIKGHNGHAENERCNSLAKLEAQKRVKTTT
1WSG Chain:D ((2-141))
LKQVEIFTDGSCLGNPGPGGYGAILRYRGREKTFSAGYTRTTNNRMALMAAIVALEALKEHCEVILSTDSQYVRQGITQWIHNWKARGWKTADKKPVKNVDLWQRLDAALGQHQIKWEWVKGHAGHPENERCNELARAAAMNPTLEDT
General information:
TITO was launched using:
RESULT:
Template:
1WSG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -56677 for 1083 contacts (-52.3/contact) +
2D Compatibility (PS) -14341 + (NN) -7179 + (LL) 0
1D Compatibility (HY) -8400 + (ID) 3650
Total energy: -90247.0 ( -83.33 by residue)
QMean score : 0.595
(partial model without unconserved sides chains):
PDB file :
Tito_1WSG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WSG-query.scw
PDB file :
Tito_Scwrl_1WSG.pdb
: