Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKARGFKTKMRGFKIFSGSAHPAFGKEVSKHLGFPLSKAVIGKFSDGEINIQISESVRGKDIFIIQPTCVPVNDNLMELLVMVDALRRSSANSITAVLPYFGYARQDRKAAPRVPITAKMVANLMQEVGIERIITMDLHAGQIQGFFDVPVDNLYGSIVFRDYIRSKALKNPIIASPDVGGVTRARYFANQMGLDLIIVDKRREKANESEVMNIIGSAKERDVILVDDMIDTAGTICKAALALKEQGATSVMALGTHAVLSGNAIKRIKESALDEVVVTNSI--PLVQKCDKITTLSVASLFAEVIRRIYHNESVQSLFT
1DKU Chain:B ((9-316))-----------NLKIFSLNSNPELAKEIADIVGVQLGKCSVTRFSDGEVQINIEESIRGCDCYIIQSTSDPVNEHIMELLIMVDALKRASAKTINIVIPYYGYARQDRKARSREPITAKLFANLLETAGATRVIALDLHAPQIQGFFDIPIDHLMGVPILGEYFEGKNLEDIVIVSPDHGGVTRARKLADRLKAPIAIIDKR---------MNIVGNIEGKTAILIDDIIDTAGTITLAANALVENGAKEVYACCTHPVLSGPAVERINNSTIKELVVTNSIKL----KIERFKQLSVGPLLAEAIIRVHEQQSVSYLF-


General information:
TITO was launched using:
RESULT:

Template: 1DKU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -277793 for 2476 contacts (-112.2/contact) +
2D Compatibility (PS) -32303 + (NN) -17577 + (LL) 2068
1D Compatibility (HY) -31600 + (ID) 7700
Total energy: -364905.0 ( -147.38 by residue)
QMean score : 0.643

(partial model without unconserved sides chains):
PDB file : Tito_1DKU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1DKU-query.scw
PDB file : Tito_Scwrl_1DKU.pdb: