Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRFLNNKHREKGLKAEEEACGFLKTLGFEMIERNFFS--QFGEIDIIALKKGVLHFIEVKSGENFDPIYAITPSKLKKMIKTIRCYLSQKDPNSDFCIDALIVKNGKFELLENITF
2WCW Chain:A ((7-82))
----------KGTRFERDLLVELWKAGFAAIRVAGAGVSPFPCPDIVAGNGRTYLAIEVKMRKEL--PLYLSADEVEQLVTFARGFGAEAYVALKLPRAAWRFFPVQMLERTEKNF
General information:
TITO was launched using:
RESULT:
Template:
2WCW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29009 for 430 contacts (-67.5/contact) +
2D Compatibility (PS) -8085 + (NN) -3902 + (LL) 552
1D Compatibility (HY) -1200 + (ID) 800
Total energy: -42444.0 ( -98.71 by residue)
QMean score : 0.351
(partial model without unconserved sides chains):
PDB file :
Tito_2WCW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2WCW-query.scw
PDB file :
Tito_Scwrl_2WCW.pdb
: