Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLTIETSKKFDKDLKILVKNGFDLKLLYKVVGNLATEQPLEPKYKDHPLKGALKDFRECHLKPDLLLVYQIKKQENTLFLVRLGSHSELF
4LS4 Chain:B ((5-91))
-LKLNLKKSFQKDFDKLLLNGFDDSVLNEVILTLRKKEPLDPQFQDHALKGKWKPFRECHIKPDVSLVYLVKDDE--LILLRLGSHSELF
General information:
TITO was launched using:
RESULT:
Template:
4LS4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -65594 for 584 contacts (-112.3/contact) +
2D Compatibility (PS) -9053 + (NN) -1045 + (LL) 180
1D Compatibility (HY) -10800 + (ID) 2300
Total energy: -88612.0 ( -151.73 by residue)
QMean score : 0.613
(partial model without unconserved sides chains):
PDB file :
Tito_4LS4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4LS4-query.scw
PDB file :
Tito_Scwrl_4LS4.pdb
: