Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEQRKESLQNNPNLSKKDIKIVEKILSKNDIKAAEM--KERYLKEGLYVLNFMSSPGSGKTTMLENLADF-K--DFKFCVVEGDLQTNRDADRLRKK-----------GVSAHQITTGEACHLEASMIEGAFDLLKDEGALEKSDFLIIENVGNLVCPSSYNLGAAMNIVLLSVPEGDDKVLKYPTMFMCADAVIISKADMIEVFN---FRVSQVKEDMQKLKP-----EAPIFLMSSKDPKSLEDFKNFLLEKKRENYQSTHSF |
| 2QM8 Chain:A ((17-262)) | ---------AGDRAALARAITLAESRRADHRAAVRDLIDAVLPQTGRAIRVGITGVPGVGKSTTIDALGSLLTAAGHKVAVLAVDPSSTRTGGSILGDKTRMARLAIDRNAFIRPSPSSGTLGGVAAKTRETMLLC----EAAGFDVILVETVGVGQSETAVADLTDFFLVLMLPGA------IKKGIFELADMIAVNKADDGDGERRASAAASEYRAALHILTPPSATWTPPVVTISGLHGKGLDSLWSRIEDHRSKLTATGEIA |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QM8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -77417 for 1664 contacts (-46.5/contact) +
2D Compatibility (PS) -23117 + (NN) -9366 + (LL) 848
1D Compatibility (HY) -2000 + (ID) 1650
Total energy: -112702.0 ( -67.73 by residue)
QMean score : 0.514
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