Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKHLAPLIHIPFKALWLGTALSMFLSLNLNAEENPTKTEPKPAKGVKNKPKSPVTNVMMTNCDNLKDFNAKQKEVLKAAYQFGSKENLGYEMAGIAWKESCAGTYKIN----FSDPSAGIYHAYIPSVLKSYGH-NNSPFLRNVMGELLIK-DDAFASEVALKELLYWKTRYHDNLKDMIKSYNKGSRWEKNEKANADAEKYYEEIQDRIRRLKESKIFDSQSSNDQELQKSANSNLDLDPIGNAMPQTLAQTETQKSQIEKSQIEEAQTQKSQEMKEAASEQAIKKPLEKEKDKPMYLAQINSADFAPAKKSPKKPAKASPKRSSKNNISVKSNTKTASKNKEVCKNCSPGQRNAILANHITLMQEL |
1QQY Chain:A ((21-114)) | ---------------------------------------------------------------------------------HGYSLAN---WVCMAEYESNFNTQAFNGRNSNGSSDYGIFQLNSKWWCK-SNSHSSANAC-NIMCSKFLDDNIDDDIACAKRVVKD---PNGMSAWVAWVKHCKGKDLSKYLASCNL-------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QQY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -35155 for 660 contacts (-53.3/contact) +
2D Compatibility (PS) -9190 + (NN) -1410 + (LL) 15080
1D Compatibility (HY) 1600 + (ID) 600
Total energy: -29675.0 ( -44.96 by residue)
QMean score : 0.202
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