Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEHKEIVIGVDIGSRKICAIVAEFKDGILRIIGTAHQDSKEINSKAIKRGRINSLAHASNAIKEVINSAKKMAGLNADEDRNNPISSFRESYHPKTKAIVSFSGAYTESIRDVTGVASTKDNVVTIDEINRAINNACAK-AGLDNDKHILHALPYRFTLDKQEVNDPLGMSGTRLEVFIHIVYTEKNNIENLEKIMIQSGVEIENIVINSYAASIATLS--NDERELGVACVDMGGETCNLTIYSGNSIRYNKYLPVGSHHLTTDLSHMLNTPFPYAEEVKIKYGDLSFESGAETPSQSVQIPTTGSDGHESHIVPLSEIQTIMRERALETFKIIHRSIQDSGFE-EHLGGGVVLTGGMALMKGIKELARTHFTNYPVRLATPVE-KYNIMG----MFEDLKDPRFSVVVGLILYKAGGHTNYERDSKGIIRYHESDDYIRKAHQSNPTPHIHSSPTERNLSDLKTPSAPLNTAKNDDFLPIKPTEQKGFFQNLLDKISKIF |
| 2YCH Chain:A ((11-375)) | --PRVEALGLEIGASALKLVEVSGN--PPALKALASRP---TPPGLLMEGMVAEPAALAQEIKELLLE----ARTRK------------------RYVVTALSNLAVILRP----I-QVP--KMPLKEMEEAVRWEAERYIPFPI-EVVLDFAPLTPLSEVQ----------EGEQVQVMVAAARQEAVAGVLEALRGAGLVPVVLDVKPFAGLYPLEARLAEEPDRVFLVLDIGAESTSLVLLRGDKPLAVRVLTLSGKDFTEAIARSFNLDLLAAEEVKRTY---------------------------------GRIYDAIRPVLVELTQELRRSLEFFRIQL--SPEVGYLLGGGSKLRGLASLLTDTL-GVNLEPVNPWEAVAVDPKRFESEQLQEIGPEFAVALGLALRGVEP----------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YCH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -198001 for 2664 contacts (-74.3/contact) +
2D Compatibility (PS) -35081 + (NN) -10704 + (LL) 5240
1D Compatibility (HY) -6800 + (ID) 2600
Total energy: -247946.0 ( -93.07 by residue)
QMean score : 0.471
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