Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMFELTKKTKFDG-EMIGYT--EELLTFLVRDFFNGIFKSKVIPKMPIFCGDVKCED-FNALRSLVYLSVLELEETINPNKIPF
2JMS Chain:A ((1-63))
----TDPEEHFDPNTNCDYTNSQDAWDYCTNYIVNS------------SCGEICCNDCFDETGTGACRAQAFGNSCLNW-----
General information:
TITO was launched using:
RESULT:
Template:
2JMS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17498 for 405 contacts (-43.2/contact) +
2D Compatibility (PS) -6140 + (NN) -1323 + (LL) 1860
1D Compatibility (HY) -800 + (ID) 550
Total energy: -24451.0 ( -60.37 by residue)
QMean score : 0.087
(partial model without unconserved sides chains):
PDB file :
Tito_2JMS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JMS-query.scw
PDB file :
Tito_Scwrl_2JMS.pdb
: