Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDSKKPHYRVSLSEQALNHEKLMRAIVKNLADTPMVLKGETALYLGYGLNRFSEDLDFDCHKKINLLGRVKSAIPNGIILNDIHIKKDTDSVGRYMVRYATKDNKEEQTLKLEISYRDAPKESEVNVIEGMRIAKIERIIDNKLCACF-DGEHTRTKARDLFDLHFLAKHYEEHFNLDLASRLKDFSKDPDKLVSDYLVDVKLDALLNQIMDLEETALELGVMAQLIHKKLEKQSHSLNALQEQQGYSNNDNSLDNSNENTYTPKRRR-
1KHH Chain:A ((6-198))----------------RWETPYMHSLAAAAAS-----RGGRVLEVGFGMAIAASRVQ-------------QAPIKEHWIIE------------------------CNDGVFQRLQNWALKQPHKVVPLKGLWEEVAPTLPDGHFDGILYDTYPLSEETWHTHQFNFIKTHAFRLLKPGGILTYCNLTSWGELMKSKY---TDITAMFEETQ--VPALLEAGFQRENICTEVMA-------------LVPPADCRYYAFPQMITPLVTKH


General information:
TITO was launched using:
RESULT:

Template: 1KHH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11995 for 1586 contacts (-7.6/contact) +
2D Compatibility (PS) -20152 + (NN) -3003 + (LL) 4932
1D Compatibility (HY) -5200 + (ID) 1150
Total energy: -36568.0 ( -23.06 by residue)
QMean score : 0.329

(partial model without unconserved sides chains):
PDB file : Tito_1KHH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1KHH-query.scw
PDB file : Tito_Scwrl_1KHH.pdb: