Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVIVLVVDSFKDTSNGTSMTAFRFFEALKKRGHAMRVVAPHVDNLGSE-EE---G----YYNLKERYIPLVTE--ISHKQHILFAK----PDEKILRKAFKGADMIHTYLPFLLEKTAVKIAREMRVPYIGSFHLQPEHISYNMKLGQ--FS----WLNTMLFSWFKSSHYRYIHHIHCPSKFIV------EELEKY-N--YGGKKYAISNGFDPM-FKFEHPQK------------SL-FDTTPFKIAMVGRYSNEKNQSVLIKAVALSRY---KQDIVLLLKGKGPD----------E-KKIK---LLAQKL--GVKTEF-GFVNSHELLEIL----KTCTLYAHTANVESEAIACLEAISVGIVPVIANSPLSATRQFALDE--RSLFEPNNAKDLSAKIDWWLENKLERERMQNEYAKSA-LNYTLENSVIQIEKVYEEAIKDFKNNPNLFKTLS |
| 2R60 Chain:A ((30-462)) | -----------PDFGGQLVYVKEVSLALAEMGVQVDIITRRIKDENWPEFSGEIDYYQETNKVRIVRIPFGGDKFLPKEELWPYLHEYVNKIINFYREEGKFPQVVTTHYGDG-GLAGVLLKNIKGLPFTFTGHSLGAQKMEKLNVNTSNFKEMDERFKFHRRIIAERLTMSYADKIIVSTSQERFGQYSHDLYRGAVNVEDDDKFSVIPPGVNTRVFDGEYGDKIKAKITKYLERDLGSERMELPAIIASSRLDQKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEKEILGKIIELIDNNDCRGKVSMFPLNSQQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMASGL-PAVVT-RNGGPAEILDGGKYGVLVDPEDPEDIARGLLKAFESEETWSAYQEKGKQRVEERYTWQETARGYLEVIQEIADR------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2R60.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -123723 for 2734 contacts (-45.3/contact) +
2D Compatibility (PS) -39548 + (NN) -16511 + (LL) 2176
1D Compatibility (HY) -4400 + (ID) 2700
Total energy: -184706.0 ( -67.56 by residue)
QMean score : 0.347
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