Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPKTETYPRLLADIGGTNARFGLEVAPRQI-ECVEVLRCED--FESLSDAVRFYLSKCKESLKLHPIYGSFAVATPIMGDF--V-QMTNN-HW-T-FSIET-TRQCLNLKKLLVINDFVAQAYAISAMQEN----DLAQIGGIKCEINAPKAILGPGTGLGVSTLIQNSD-GSLKVLPGEGGHVSFAPFDDLEILVWQYARSKFNHVSAERFLSGSGLVLIYEALSKRKGLEKVAKLSKAELTPQIISERAL--NGDY-PICRLTLDTFCSMLGTLAADVALTLGARGGVYLCGGIIPRFIDYFKTSPFRARFETKGRMGAFLASIPVHVVMK-KTPGLDGAGIALENYLLHDRI |
| 3MCP Chain:A ((5-321)) | --TNDNRIVMTLDAGGTNFVFSAIQGG-KEIADPVVLPACADCLDKCLGNLVEGFKAIQAGLPEAPVAISFAFPGPADYQAGIIGDLPNFPSFRGGVALGPFLEDIFGI-PVFINNDGSLFAYGEALTGVLPEINRRLREAG-STKRYKNLLGVTLGTGFGAGVVIDGELLRGDNAAGGYVWCLRNKK------------Y---PEYIVEESVSIRAVMRVYAERSGDA----------GARTPKEIFEIAEGIRPGNREAAIAAFEELGEMAGDALASAITLID-G-LIVIGGGLSGASKYILP--VLLKEMNAQTGMM------QKEVYDLDEEKSFAGFARGEAVEVLVPGT |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3MCP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -129512 for 2220 contacts (-58.3/contact) +
2D Compatibility (PS) -30414 + (NN) -6518 + (LL) 3500
1D Compatibility (HY) 800 + (ID) 2150
Total energy: -164294.0 ( -74.01 by residue)
QMean score : 0.278
|
|
|