Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLDLSYSLERVLQEDPAARNKWEVLLLY-PGIHALLCYRLAHALHKRRFYFIARALSQLARFITGIEIHPGAKIGRGLFIDHGMGVVIGETTEIGDDVTIYHGVTLGGTGKFKGKRHPTLGNRVVVGAGAKVLGAICVGDDVRIGANAVVLSDLPTGSTAVGAKAKTITKDR
1SST Chain:B ((81-240))
-------IQAVRHRDPAVE-LWSTPLLYLKGFHAIQSYRITHYLWNQNRKSLALYLQNQISVAFDVDIHPAAKIGHGIMFDHATGIVVGETSVIENDVSILQGVTLGGT-----DRHPKVREGVMIGAGAKILGNIEVGKYAKIGANSVVLNPVPEYATAAGVPARIV----
General information:
TITO was launched using:
RESULT:
Template:
1SST.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -142178 for 1255 contacts (-113.3/contact) +
2D Compatibility (PS) -16635 + (NN) -6284 + (LL) 496
1D Compatibility (HY) -11600 + (ID) 3450
Total energy: -179651.0 ( -143.15 by residue)
QMean score : 0.528
(partial model without unconserved sides chains):
PDB file :
Tito_1SST.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SST-query.scw
PDB file :
Tito_Scwrl_1SST.pdb
: