Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTEMKSFLKLFAQPLLVVLAFMLLYALAHAVLGFYVKKDSAPMSPNVEKSETERQNSTFSPKEEANATTTATEQNPTKDTVPPLDTATQKQEIKQEIKQEIKQEIKQEIKQEIKQEIKQETKQEQEKENKPKQNSVSPVQNDQKTPTTPLMGKKPLEYKVAVSGVNVRAFPSTKGKIIGSLIKNKSVKVLEIQNDWAEIEFSHETKGYVFLKLLKKAE |
| 1XOV Chain:A ((200-254)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------VVDSVPMLSKMDFKSSPIKMYKAGSSLLVYEHNKYWYKAYIN-DKLCYIYKSFCISNG |
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General information:
TITO was launched using:
| RESULT:
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Template: 1XOV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -28915 for 302 contacts (-95.7/contact) +
2D Compatibility (PS) -5642 + (NN) 3429 + (LL) 12092
1D Compatibility (HY) -3600 + (ID) 450
Total energy: -23086.0 ( -76.44 by residue)
QMean score : 0.438
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