Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKLFDYAPLSLAWREFLQSEFKKPYFLEIEKRYLEALKSPKTIFPKSSNLFCAFNLTPPYAVKIILLGQDPYHSTYLENEQELPVAMGLSFSVEKNAPIPPSLKNIFKELHANL-GVPVPCCGDLSAWAKRGMLLLNAILSVEKNQAASHKYIGWEAFSDQILIRLFETTTPLIVVLLGKVAQKKIALIPKNKHIIITAPHPSPLS--RGFLGSGVFTSVQKAYREVYRKDFDFSL
1OKB Chain:A ((7-204))-----------TWRRELAAEFEKPYFKQL-MSFVADERSRHTVYPPADQVYSWTEMCDIQDVKVVILGQDPYHGP---NQ-----AHGLCFSVQKPVPPPPSLVNIYKELCTDIDGFKHPGHGDLSGWAKQGVLLLNAVLTVRAHQANSHKDRGWETFTDAVIKWLSVNREGVVFLLWGSYAHKKGATIDRKRHHVLQAVHPSPLSAHRGFLGCKHFSKANGLLKLSGTEPINWRA


General information:
TITO was launched using:
RESULT:

Template: 1OKB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -116498 for 1531 contacts (-76.1/contact) +
2D Compatibility (PS) -20930 + (NN) -11159 + (LL) 1852
1D Compatibility (HY) -14800 + (ID) 4400
Total energy: -165935.0 ( -108.38 by residue)
QMean score : 0.614

(partial model without unconserved sides chains):
PDB file : Tito_1OKB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1OKB-query.scw
PDB file : Tito_Scwrl_1OKB.pdb: