Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLKKITHQIKALSELVALEHTIFSSMFLLMAMVISSYQKNQTLFFGLETLILCFLALLGARNFAMGFNRLVDRDIDKDNPRTKNRPSVDGRISVKGMVIFSVSNALLFVGVSYFINPLAFKLSLPFLIILGGYSYFKRFSSLAHFVVGLALGLAPIAGSVAVLGDIPLWNVFLALGVMLWVAGFDLLYSLQDMEFDKERGLFSIPSQLGEKWCLNLSRLSHLVALICWLCFVKCYHGGLFAYLGLGVSALILLYEQILVARDYKNIPKAFFVSNGYLGVVFFIFIVLDVGFKHA |
1IFP Chain:? ((1-44)) | MQSVITDVTGQLTAVQADITTIGGAIIVLAAVVLGIRWIKAQFF---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1IFP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5287 for 171 contacts (-30.9/contact) +
2D Compatibility (PS) -4599 + (NN) -3656 + (LL) 19248
1D Compatibility (HY) -2800 + (ID) 550
Total energy: 2356.0 ( 13.78 by residue)
QMean score : 0.021
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