Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTHVFEVYPKVNVFLKILHK-EGAYHKIISRMCLVKNKLKDIISVKN-ALSFSLKGDFDCP-LEENSLFKALQVLKKFLVQKNFSHSVIKSLDTLAIEVEKNIPTQAGLGGGSADAGGLLYHLNQMFDWRLSLKELYTMGSLVGADTNFFISQYKSANATSYGEVIENFEEESLEDRLEIYAPNHVFCSTKAVYQAYKPETCFF-Q-AKEWLKKTSLECLKTYDRNELNDLLKPALRTNPALKDIESQL---S-KEWFFSGSGSAFFRLKNTQKGANETHCQQ |
1UEK Chain:A ((1-249)) | --MERLAPAKVNLGLSVRFRREDGYHELHTLFAPFS-LADRLVVEPVSSG-LHF----QGPYGRENLAYRAASLYLEAAG----------QPGGVRILLEKRIPEGAGLGGGSSDAAQVLLALQALYPA---EVDLFALARTLGADVPFFLLGR-GAEARGVGERLKPLA--LPPVPAVVFFP-GLRVPTPLVYRAVRPEDFGPDLPVEAILEALARGEEPPYW----NSLEGPAFRLFPELKEVRGRMRALGLRGVLMSGSGSAFFGLAEGPDHARRAAEAL |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1UEK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -93325 for 1972 contacts (-47.3/contact) +
2D Compatibility (PS) -25030 + (NN) -1616 + (LL) 1524
1D Compatibility (HY) -9600 + (ID) 3200
Total energy: -131247.0 ( -66.56 by residue)
QMean score : 0.293
|
|
|