Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHTVLQIGAGGVGSVVAHKMGM----------------------NRDVFKNIILASRSLDKCHA-IKESMLKKGLG-----------EIGVE----------------QVDADDTQALIALIQKHKPKVVVNVALPYQD---LTIMQACLETKTHYIDTANYEHPDLAKFEYKEQWAFDKAYKEAGILGVLGAGFDP--GVTNAYVAHAQRHHFDTIHTLDILDCNAGDHKRPFATNFNPEINLREVSSKGRYYENGKWIETKPLEIKQVWAYPQIGEMDSYLLYHEELESLVKNVKGLRRARFFMTFSQNYLTHMKCLENVGMLGIKEIEHQGVKIVPIQFLKTLLPDPESLAKDTTGKTNIGCYMTGIKNNQDKTLYIYNVCDHKKCYEEVGSQAISYTTGVPAMCAAKMICNDTWSVEHFKAGVFNVEELNTDPFMEELIKQGLPYEVIER |
| 1GR0 Chain:A ((15-205)) | EVRVAIVGVGNCASSLVQGVEYYYNADDTSTVPGLMHVRFGPYHVRDV-KFVAAFDVDAKKVGFDLSDAIFAS-ENNTIKIADVAPTNVIVQRGPTLDGIGKYYADTIELSDAEPVDVVQALKEAKVDVLVSYLPVGSEEADKFYAQCAIDAGVAFVNALPVFI--------ASDPVWAKKFTDARVP-IVGDDIKSQVGATITHRVLAKLFEDRGVQLDRTMQLNVGGNMDFLNMLEDVHIGPSDHVGWLDDRKWAYVRLEGRAFGDVPLNLEYKLEVWDSPNSAGVIIDAVRAAKIAKDRGIGGPVIPASAYLMKSPPEQLPDDIARAQLEEFIIG-------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GR0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -53879 for 1042 contacts (-51.7/contact) +
2D Compatibility (PS) -14621 + (NN) -7398 + (LL) 8388
1D Compatibility (HY) -6800 + (ID) 950
Total energy: -75260.0 ( -72.23 by residue)
QMean score : 0.506
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