Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAEITKAKNLGEWLDMRLGTNNLV-KVLMTEYWIPKNINFLWAMGVILLTLLGVLVISGIFLLMYYKPDAKMAFDSVNFTIMQEVAYGWLWRHMHATAASMIFVIIYIHMFVGIYYGSYKKGREMIWISGMILFVVFSAEAFSGYMLPWGQMSYWAAAVITNLFGGIPFIGADVVEWIRGNYVVADSTLTRFFMLHVFLLPIAIILLVGVHFYSLRILHVNNQEGEEIDFELEEKKFIEGKKKESKVIPFWPVFLSKDIFVVCTFMVFFFYLVCYQYDFAMDPINFERGNSLKTPPHIYPEWYFLWSYEVLRGFFFSADL------GLMAFGVAQVIFF-------------LLPFLDRSPVVAPAHKRPAFMVWFWLLIIDMIVLTIYGKLPPLGIGKYIGLFGSITFLALFFVVLPIITIAERKKQGGVR |
| 2QJY Chain:M ((17-417)) | -----------KWLHSRLPIVALAYDTIMIP--TPRNLNWMWIWGVVLAFCLVLQIVTGIVLAMHYTPHVDLAFASVEH-IMRNVNGGFMLRYLHANGASLFFIAVYLHIFRGLYYGSYKAPREVTWIVGMLIYLAMMATAFMGYVLPWGQMSFWGATVITGLFGAIPGIGHSIQTWLLGGPAVDNATLNRFFSLH-YLLPFVIAALVAIHIWAFHSTGNNNPTGVEV-------RRTSKAEAQKDTVPFWPYFIIKDVFALAVVLLVFFAIVGFMPNYLGHPDNYIEANPLRTPAHIVPEWYFLPFYAILRA--FTADVWVVQIANFISFGIIDAKFFGVLAMFGAILVMALVPWLDTSPVRS-GRYRPMFKIYFWLLAADFVILTWVGAQQTTFPYDWISLIASAYWFAYFLVILPILGAIEKPVAPPAT |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QJY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -308749 for 2809 contacts (-109.9/contact) +
2D Compatibility (PS) -38503 + (NN) -15896 + (LL) 2132
1D Compatibility (HY) -45600 + (ID) 7900
Total energy: -414516.0 ( -147.57 by residue)
QMean score : 0.311
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