Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSRKKGIILVLSVILIFSIGLLVNNLMTNNKDTAKPKKKTVAAVKKKKETPPKPKEPFNIDFTGDIMFDWDLRPVLAEKGMDYPFNNVREELKSSDYTFVDLETAITTRTKKVPYQEFWIKSDPSSLTALKNAGVDMVNISNNHILDYY-EDGLLD--TTAALRANNLAYVGAGKNEDEAYQLKVADIKGNKVGFMSFCHFFPNTGWIADEDTPGVTNGYDLNLVEEKIKEERAKNKDIDYMVVYFHWGVEKTNTPVDYQTQYVKKLVDDNLVDAIVASHPHWLQGFEVYKDVPIAYSLGNFLFPDYVSGHSAETGIYKLNFDQGKVTAHFDPGIISGNQINMLEGSSKTAQLNYLQSISPNATINSNGDISAK |
| 1T70 Chain:A ((1-184)) | ----------------------------------------------------------MRVLFIGDVFGQPGRRV------LQNHLPTI---RPQFDFVIVNMENSAGGFG-----------MHRDAARGALEAGAGCLTLG-NHAWHHKDIYPMLSEDTYPIVRPLNYADPG-----TPGVGWRTFDVNGEKLTVVNLLGRVF-ME-------A---VDNPFRTMDALLER----D-DLGTVFVDFHAEATSE------KEAMGW-HLAGR-VAAVIGTHTHVPTADTRIL----------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1T70.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -59712 for 1447 contacts (-41.3/contact) +
2D Compatibility (PS) -19181 + (NN) -3152 + (LL) 10244
1D Compatibility (HY) -6800 + (ID) 1400
Total energy: -80001.0 ( -55.29 by residue)
QMean score : 0.415
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