Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKPSMKRQIAQTGIIHRPLPIETEHALETLAKKKQVLSSRTLFSSKQHVSLEFTHQGAGDFTISGQDEIKLSSPVVMPHWPAGAPDDGDYTNFGNVTISASIGNEDWSGFNRVRIQVFPDFPGVTNPYLMISFKNDGTVKVPDIYGREGVHGVNLINHEWNDVIFEIEGLPRDRMTEMSFSYYLNGPERLTAGTMELFINEIKLEQISEPEISKGWLPQNNTLIYSHNGYSKDMPKVAFCANKHAATTFTIHDKETDKVVFTGKSYQNATETGNFVILDFSDLQTVGEYYLKFADMQTEIFQIGTSEVIWESSIWKSLNFIFCERCGCPVFG-----KHTTCHADIIAE-----------------------HDGKQLSFNGGWHDAGDVSQQLIQTAEVTMALYEMAASLPEKE--ETLRMRLLEEGEWGLDFILKTRF--GDG---FRATSA-----GMTRWTDGLVGGMDDAIARV----H---NQAYENFYCAGIEAYIGSQIAD-NATMQNHLLRIAEEDLLFAIKELEKHGTSQKPIFWEHTYQTSESLYYATASWAASMVYQLTNKEIYAEKAAEWLDLMLEAQEKAGIRDSETSELYKGFFYRDKSHKVIQHFNHQAREHLYLLALEAALETQPS-HAEKQTWLQA----------VEMYGDYLKKVTRFTKPYPLIPAGLYKKDEYLDEASFHLQHLLIDERAIEEYQLQFEQGIKINDEVALRKFPIWFS-FRGNNAILLSAGKAASIAGKILKD--KALLDIAEGQLQWVIGMNPFGQSMMHGEGYRYAQQYSV--LNGE-------ITGEIPVGMETF-RNEDEPYWPEFNNATYKEVWVGNAGKWMSIVADLNKITGKS |
| 2YIK Chain:A ((38-518)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YNYAKALQYSMFFYDANMCGTGVDENSLLSWRGDCHVYDARLPLDSQNTNMSDGFISSNRSVLDPDGDGKVDVSGGFHDAGDHVKFGLPEAYAASTVGWGYYEFKDQFRATGQAVHAEVILRYFNDYFMRCTFRDASGNVVAFCHQVGDGDIDHAFWG----APENDTMFRRGWFITKEKPGTDIISATAASLAINYMNFKDTDPQYAAKSLDYAKALFDFAEKNPKGV-VQ-GEDGPKGYYGS--SKWQDDYCWAAAWLYLATQNEHYLDEAFKYYDYYA----P----------PGWIHCWNDVWSGTA-CILAEIND---------LY--DKDSQNFEDRYKRASNKNQWEQIDFWKPIQDLLDK---WSGGGI----------------------------------------TVTPGGY-----VFLNQW-GSARYNTAAQLIALVYDKHHGDTPSKYANWARSQMDYLLGKNPLNRCYVVGYSSNSVKYPHHRAASGLKDANDSSPHKYVLYGALVGGPDASDQHVDRTNDYIYNEVAIDYNAAFVGACAGLYRFFGD- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2YIK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -80647 for 3819 contacts (-21.1/contact) +
2D Compatibility (PS) -43481 + (NN) -19392 + (LL) 24220
1D Compatibility (HY) -2400 + (ID) 3150
Total energy: -124850.0 ( -32.69 by residue)
QMean score : 0.314
|
|
|