Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------------MSSERSLSSRFIEGLSIFA-------QKISSQKHIMAIRDGFAAMI---------PITIIAAFF------LLVNNVLLQPENGLLKFIPNVENYLGVGIQVYNATL-------GIMAILA--AFLIGNFL---AKSYGMEGRTEGVIAVAAYVVLIPASSHLMSVDGKAFEAGGVLTQEMTSS----------TGMFL----------AIIAALVS-------ITMLAKFSKSKKLKISMPESVPPAIAKSFNILIPSFLVLSILAIIEVL--------VVSFVSMSIPEIIVKVLQIP-----------------LVGGFQTLPG---------------------ILLYVF----------LAGFLWVF---------------GIHGAFVLGAISGPVLLTSLQQ--NIDAV--NAGTALPNIVTQPFLDAFVYM---GGGGTIICLVIAIFIASKRPDHRMVTKF-------GLIPSIFNVSEPLMFGLPVVFNPIYGIPLVIA-----PLASTAMAYFATSWGWISQTYILI-PWVTPPVLSGYLAT----GGDIRASILQIAIIIVGT---------LIYLPFVLVANRAYVLEQKAAGKVEAVTNGEV------------- |
| 4M1K Chain:A ((6-688)) | EYDLKRLRNIGIAAHIDAGKTTTTERILYYTGRIAAVTTCFWKDHRINIIDTPGHVDFTIEVERSMRVLDGAIVVFDSSQGVEPQSETVWRQAEKYKVPRIAFANKMDKTGADLWLVIRTMQERLGARPVVMQLPIGREDTFSGIIDVLRMKAYTYGNDLGTDIREIPIPEEYLDQAREYHEKLVEVAADFDENIMLKYLEGEEPTEEELVAAIRKGTIDLKITPVFLGSALKNKGVQLLLDAVVDYLPSPLDIPPIKGTTPEGEVVEIHPDPNGPLAALAFKIMADPYV--GRLTFIRVYSGTLTSGSYVYNTTKGRKERVARLLRMHANHREEVEELKAGDLGAVVGLKETITGDTLVGEDAPRVILESIEVPEPVIDVAIEPKTKADQEKLSQALARLAEEDPTFRVSTHPETGQTIISGMGELHLEIIVDRLKREFKVDANVGKPQVAYRETITKPVDVEGKFIRLTGGRGQYGHVKIKVEPLPRGSGFEFVNAIVGGVIPKEYIPAVQKGIEEAMQSGPLIGFPVVDIKVTLYDGSYHEVDSSEMAFKIAGSMAIKEAVQKGDPVILEPIMRVEVTTPEEYMGDVIGDLNARRGQILGMEPRGNAQVIRAFVPLAEMFGYATDLRSKTQGRGSFVMFFDHYQEVPKQVQEKLI |
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General information:
TITO was launched using:
| RESULT:
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Template: 4M1K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -390843 for 3056 contacts (-127.9/contact) +
2D Compatibility (PS) -47994 + (NN) 3982 + (LL) 368
1D Compatibility (HY) -14400 + (ID) 4150
Total energy: -453037.0 ( -148.25 by residue)
QMean score : 0.143
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