Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------------------------------------LEKKK---KFRLFDAVLMAVC-----VVLVVESAAPAAAIGS---------------------------SQFFWWIALLILFFLPY-----GLVSAELGTTYDDE-------GGIYDWVKRAFGRKWGA-RVAWL--YW-------------------------INYPIWMASLAVLFVEV-ITQIFPVSFGTPVSILIQL--------------IFVWIVVIVS--CYPVSDSKWILNIAAFCKVAIMLCLGV-----LGIYFAITKGLANDFS-GKALLP-TFDLESLSFI-----SVILFNF-----------------------LGFEVVTTLASDMENPK------KQIPQAIIYGGILIAFFYLLAAFGMGAA---IPTSELSTSGGLIDS-----FIMLIGGVNPFVIIIGIMFM---YTLVANLVSWA-----LGVNYVAMYAAK---------NKDLPAVFG----KTNPKNDMPTGTSILNGIVASVLIVAAPLI----PNENIFWAFFALNVVALLGSYI--------------LMFPAFLKLRKLDPDRERPFKVPGGKILLYLMTFVPMILLIITLIFSAVPLNGSSAELNEKIPILI--GTIV-AVIVGEICIWLAGKRKDKGEIKNEND |
| 4OIF Chain:A ((2-686)) | PKYERTYTTQANFILHGGDYNPDQWLDRPDILQADLELMKLSHTNTFTVGVFAWSALEPEEGVYRFEWLDKVFDDIYRIGGRVILATPSGARPAWLSQKYPEVLRVNAARVRQLHGGRHNHCFTSSVYREKTQHINRLLAERYGDHPALLMWHVSNEYGGECHCNLCQEAFREWLKKKYNHDLDALNAAWWTSFWSHTYTDWSQIESPSPIGEHTIHGLNLDWKRFVTDQTISFFENEIVPLRELTPHIPITTNFMADTHDLIPFQGLDYSKFAKHLDVISWDAYPAWHNDWESTADLAMKVGFINDLYRSLKQQPFLLMECTPSLVNWHKVNKAKRPGMHFLSSMQMIAHGSDSILYFQWRKSRGSFEKFHGAVVDHDNRTDSRVFQEVAEVGKALKKMSGIVGTNRPAEVAILYD--WENNWALNDAQGFAAETKRYPQTLVQHYRPFWERDIPVDVITKEHDFSRYKLLIAPMLYLVSEETIARLKEFVANGGTLVMTYISGIVDEHDLAYLGGWHQDLREMFGMEPIETDTLYPRDRNSVHYRGRSYELKDYATVIKIHAATVEGVYEDDFYADTPAVTSNQYGKGQAYYIGGRLEDQFHRDFYQELMEKLDLRPVLFVKHEKGVSVQARQAPECDYVFIMNFTE---EKQAVVLEEKVKDLFTGEEIVGEIMLDKYEVRVVEKRR---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OIF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -420486 for 3089 contacts (-136.1/contact) +
2D Compatibility (PS) -46622 + (NN) -1015 + (LL) 316
1D Compatibility (HY) -18800 + (ID) 4200
Total energy: -490807.0 ( -158.89 by residue)
QMean score : 0.222
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