Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDFYEISSKTVASLTRNERILFDYVVKNMNLIKNQSIREVSAECFVSTTTFLRFVRKLGFTGYSEFTTVLKFTLLGHTELKPSPFVVEQSDYREEYLKNIIESVRVLEPSKIKKITKKLVNKPRIYFFAKGLSKHAAKYIKYLYT------MSGFLVEFPEDY--------------QYRQAV-LPHIGKDDLVFILTYGGHDIELIQTAQKLKSRNETPMLISITGADNNIIQNM---SDINLYIFTDEIEMNNLDITSRISTIAIMELILYQFMEDETSSF |
| 2YVA Chain:A ((14-191)) | ---------------------------------------------------------------------------------------------QTQIAAAEALPDAIS-RAAMTLVQSLLNGNKILCCGNGTSAANAQHFAASMINRFETERPSLPAIALNTDNVVLTAIANDRLHDEVYAKQVRALGHAGDVLLAISTRGNSRDIVKAVEAAVTRDM-T-IVALTGYDGGELAGLLGPQDVEIRIPSHRSAR-I-QEMHMLTVNCLCDLIDNTLF------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YVA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -72158 for 1306 contacts (-55.3/contact) +
2D Compatibility (PS) -16771 + (NN) -7187 + (LL) 7840
1D Compatibility (HY) -1200 + (ID) 800
Total energy: -90276.0 ( -69.12 by residue)
QMean score : 0.462
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