Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MARKYEIMYIIRPNIEEDEKKAVVERFDGILTENGAEIIESKEWGKRRLAYEINDYRDGFYHIVKLNADKADSINEFDRLAKISDDIIRHMVIKEEA--
1LOU Chain:A ((1-97))
-MRRYEVNIVLNPNLDQSQLALEKEIIQRAAENYGARVEKVEELGLRRLAYPIAKDPQGYFLWYQVEMP-EDRVNDLARELRIRDNVRRVMVVKSQEPF
General information:
TITO was launched using:
RESULT:
Template:
1LOU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38253 for 646 contacts (-59.2/contact) +
2D Compatibility (PS) -10053 + (NN) -2866 + (LL) 272
1D Compatibility (HY) -6000 + (ID) 1300
Total energy: -58200.0 ( -90.09 by residue)
QMean score : 0.600
(partial model without unconserved sides chains):
PDB file :
Tito_1LOU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1LOU-query.scw
PDB file :
Tito_Scwrl_1LOU.pdb
: