Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------------------------------------------------------------------------------LSNFTAKVPLSERMADVLISKDRWKDDEEGYLKVKYGLEIILINVMKFALVYGIALVTGLLLQTVTVHLSYLWLRRY-SFGLHATKTLNCTLISLLMFVLAPFVFQNIPSNNWIVLGTFGFIL--------LNMFLFAPADTESLPLIG------EEHRKTLKRKAM-IGTLILTGIAL-LIPFAEMKTLIMVGSL-FQVISINPLTYKLLKRRYRNYEKYE------------------------ |
| 4XNV Chain:A ((38-382)) | SFKCALTKTGFQFYYLPAVYILVFIIGFLGNSVAIWMFVFHMKPWSGISVYMFNLALADFLYVLTLPALIFYYFNKTDWIFGDAMCKLQRFIFHVNLYGSILFLTCISAHRYSGVVYPKSLGRLKKKNAICISVLVWLIVVVAISPILFYSGTGVRKNKTITCYDTTSDEYLRSYFIYSMCTTVAMFCVPLVLILGCYGLIVRALIYKMKKYTCTVCGYIYNPEDGDPDNGVNPGTDFKDIVCPLCGVGKDQFEEVEEPLRRKSIYLVIIVLTVFAVSYIPFHVMKTMNLRARLDFQ----TPAMCAFNDRVYATYQVTRGLASLNSCVNPILYFLAGDTFRRR |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XNV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -94807 for 1155 contacts (-82.1/contact) +
2D Compatibility (PS) -20712 + (NN) -4235 + (LL) 572
1D Compatibility (HY) -14800 + (ID) 2200
Total energy: -136182.0 ( -117.91 by residue)
QMean score : 0.174
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