Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRGQEEIDKEQYQVLFIKERLIPCVLGAVIGDCLGVPVEFKDREYLK--QNPIVEMIGYGTYNQPKGTWSDDSSLTFALMESLI-S-GYDINRIVNNMVSFMDDGFWTPYGEVFDIGSVTRESLNRYKN-GVSVFECGGKDNFDNGNGAIMRIMPLVFY-LGKDFSFGKKN-KITEEVTRITHAHPRSILGSYVYIELLQNLFANMDKKLAYEEMQNYIRKNYSDYPFKDELQYYNNILEGNLYELKESNIKSSGYVVDTLEASIWAFLTTNSYKEAVLKAVNLGGDTDTIAFITGSLAGIYYKMEQIPVNWIDQIAKKE--DILNLCNRFIESLIKQ |
| 2WOE Chain:A ((8-296)) | -------------GPSVHDRALGAFLGLAVGDALGATVEFMTKGEIAQQYGIHRKMTGGGWLRLKPGQITDDTEMSLALGRSLAAKGTLDVADICEEFALWLKSR-------PVNVGNTCRRGIRRYMHEGTTTA---PYSEGDAGNGAAMRCLPAALATLGH---P-ADLEPWVLAQARITHNHPLSDAACLTLGRMVHHLIGGRGMKACREEANRL----------VHQ---H-----RDFH-FEPYKGQSSAYIVDTMQTVLHYYFVTDTFKSCLIQTVNQGGDADTTGALAGMLAGATYGVDDIPSGWLSKLDMKVEREIRRQVDALLALA--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WOE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -172321 for 2645 contacts (-65.1/contact) +
2D Compatibility (PS) -29221 + (NN) -6706 + (LL) 2724
1D Compatibility (HY) -6800 + (ID) 3650
Total energy: -215974.0 ( -81.65 by residue)
QMean score : 0.460
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