Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----------MSKTTQMNSEIFQINLEKTLKEIMVAKGL-QSDEIRFVIVPVEEKGKMLDGSDEMMKRLVLTKENIGNKQLVLKDVVDVLGGLFPKAPIWINVSFLEMNGEKAIFKLETSLRFRKPTLLRNAETGHAPFKAIT
2GU3 Chain:A ((9-136))
KEEGHEAAAAEAKKETDLAHVDQVETFVGKEKYYVVKGTDKKGTALYVWVPADKKAKILSKEAKEGISEDKAAKIIKDEGLV-SKQKEVHLAREGNVLLW-EVTYLDKEGQYSLSYVD----FTTGKILKNITP---------
General information:
TITO was launched using:
RESULT:
Template:
2GU3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34925 for 844 contacts (-41.4/contact) +
2D Compatibility (PS) -11885 + (NN) 1360 + (LL) 1152
1D Compatibility (HY) -2000 + (ID) 1100
Total energy: -47398.0 ( -56.16 by residue)
QMean score : 0.380
(partial model without unconserved sides chains):
PDB file :
Tito_2GU3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GU3-query.scw
PDB file :
Tito_Scwrl_2GU3.pdb
: