Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTSEFFSTLLLIIGLLIGFFLAILLILAGIRRFFCSAEEPLKRIRRYQVWHNRYQFNEEVTSFFTVIGATLLVSLITVQITAIPFQYTVLIFWSSWLFHLLSFWKKIRVPKKMKNEMIQLAGFLLITALYFVGYFAMKSLHFSIIHVADFPGVIQFGIRTYLTICSLFVASGALIVWQRIYVKLLK |
| 3DBO Chain:A ((53-86)) | -------------------------------RRWLSKTEFLSRLRGAQADPGLRNDLAVLAGDTT------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DBO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1234 for 127 contacts (-9.7/contact) +
2D Compatibility (PS) -3478 + (NN) 1723 + (LL) 16280
1D Compatibility (HY) 1200 + (ID) 400
Total energy: 14091.0 ( 110.95 by residue)
QMean score : -0.026
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