Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSVISIILVVLIAFLAGIEGILDEFQFHQPLIACTLIGLVTGNLTACIILGGTLQMIALGWANIGAAVAPDAALASVASAIILVLGGQGVAGIPSAIAIAIPLAVAGLFLTMIVRTLAVPIVHLMDRAAEKGNIRSVEWLHISAICMQGVRIAIPAAALLFIPADSVQSFLEAMPAWLTDGMAIGGGMVVAVGYALVINMMATKEVWPFFVIGFVVAAISQLTLIAIGALGVALALIYLNLSKMGGGNSNGGGGGNSRDPLGDILNDY |
2K73 Chain:A ((1-183)) | -----------------------------------------------------------------MLRFLNQASQGRGAWLLMAFTALALELTALWFQHVMLLKPCVLSIYERAALFGVLGAALIGAIAPKTPLRYVAMVIWLYSAFRGVQLTYEHTMLQLYPSPFATS---------DFMVRFPEWLPLDKWVPQVFVASGDCAERQWDFLGLEMPQWLLGIFIAYLIVAVLVVISQPFKAKKRDLFGRGHHHHHH----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2K73.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -104669 for 1108 contacts (-94.5/contact) +
2D Compatibility (PS) -19242 + (NN) -435 + (LL) 7336
1D Compatibility (HY) -5600 + (ID) 1050
Total energy: -123660.0 ( -111.61 by residue)
QMean score : -0.090
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