Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MINSRFYEGFEG-EAELSFVAGDNKLLIWNGYFETILDNLLDCNVEREGVLKEYFNHEGWY-DDSPWMIEDNSLTIIQLKCFDINKINQTSMKDDLEEVVKTIISFLENNRFSKIYIEYE |
4JM1 Chain:A ((1-84)) | -GADKYIDTITGFSCEKAAVTDNGFLVIAI----------------------DADSDSGYDMLASQFLEEAKKEGVSGLKGVLIVDIKNAKFEQG--AVVGK-----------RIGKAYK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JM1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1026 for 587 contacts (1.7/contact) +
2D Compatibility (PS) -8273 + (NN) 4926 + (LL) 2768
1D Compatibility (HY) -2800 + (ID) 800
Total energy: -3153.0 ( -5.37 by residue)
QMean score : 0.244
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