Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LIMNANLEVNAELVKESYVYLLSRYLVLRQENFDTKEDKIP--YNTLKHNSVSPADANFVNPNFDVVYSEAWIAVDDEHAVVLEVPEIKNRYYTVQLLDGWGEVVTNINERNFPEHPHGKFAFVKKGTNPSIPSDAIKIELPSEKVKVLLRVEQKDDPEGAVKLQK-AFKFDAPDNIKIKEPLEIPHFTNAEFLLEEIYSNLE-----ELLATYPDKMPKAAEFQDKARKVAAYIELGD------DQKAEVRNLIVKEALPYFTNGA---KGFGTQKGGWSVTYVA-GAFENDILARAIINYGGIWANSIQEA-LYFIGQKGTDDELLTGDKIYKIHFSADELPAELANAFWSVTLYSVPDYHVIPNELNKFCINNYTGPKLSEDGSLTLYIASEKPADVDPGNW--LPSKAGKEFSLNFRLYVPKKEVLEGK------VFLPPLEVF |
| 4FDW Chain:A ((21-401)) | ----------ASLEDFSIEQLPAKTIYALGENIDLTGLNVTGKYDDGKQRPVKVTSEQISGFSSSVPVDKQEVTITIEG---------KQKSFSVHIS------PVRVENGVLTEILKGYNEIILPNSVKSIPKDAFR---NSQIAKVVLN-------EGLKSIGDMAFFNSTVQEIVFPSTLE--------QLKEDIFYYCYNLKKADLSKTKITKLPASTFVYAGIEEVLLPVTLKEIGSQAFLKTSQLKTIEIPENVSTIGQEAFRESGITTVKLPNGVTNIASRAFYYCPELAEVTTYGSTFNDD-PEAMIHPYCLEGCPKL-----ARFEIPESIRILGQGLLGGNRKVTQLTIPAN---VTQINFSAFNN-TGIK-------EVKVEGTTPPQVFEKVWYGFPDDIT-------VIRVPAESVEKYKNANGWRDFTNKITTF |
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General information:
TITO was launched using:
| RESULT:
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Template: 4FDW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -45669 for 2667 contacts (-17.1/contact) +
2D Compatibility (PS) -36578 + (NN) -7334 + (LL) 4840
1D Compatibility (HY) -11200 + (ID) 3950
Total energy: -99891.0 ( -37.45 by residue)
QMean score : ?
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