Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VLDTLNQLSLPEGSLLHSDQGSVYTSYEYYQCCKKKNVIRSMSRKGTPADNAPIECFHSSLKCETFYHKTAYKYAKSIVIQIVKDYIKYYNEKRIQQKLGYQSPINFRKQAA
1C6V Chain:A ((112-202))
--------------HLHTDNGANFASQEVKMVAWWAGIEHTFG-----------EAMNHHLKNQIDRIRE----QANSVETIVLMAVHCMNH-KRRGGIGDMTPAERLIN--
General information:
TITO was launched using:
RESULT:
Template:
1C6V.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10029 for 406 contacts (-24.7/contact) +
2D Compatibility (PS) -8143 + (NN) -833 + (LL) 1492
1D Compatibility (HY) 800 + (ID) 750
Total energy: -17463.0 ( -43.01 by residue)
QMean score : 0.199
(partial model without unconserved sides chains):
PDB file :
Tito_1C6V.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1C6V-query.scw
PDB file :
Tito_Scwrl_1C6V.pdb
: