Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDILRKGNKDLIKDINRYTVLNLIREKGEITRTEIAKKCDFGMSTLTYILDDLQQEGIILEGAE-TSSTGGRRAKLVRFNKDYGFVVSVKVEEEQLLFALTDLNAEIIENTSIPFSSEKKPEEAIELIAKNVKKMCGN--RDMNHLLGVGIAISGLVNRKKGTVIRSTML-GWENVALEAMLHAHFPDIPVYVDKNINCYTLAELWLGEGKQSNNFATVSVGAGLGLSVVINRQIYYGAQGGAGEFGHTTIQPGGYKCHCGQKGCLEMYASEFYFRNRGEELKEAYPTSELNDFHFDKVAKSARAGDEMATELMGKMGEYLGYGIRNIINTFNPEKVIIVGEGLHHRDLFLTKIDEIASQNFFSGAGFETEITTTSLEDPAWLQGAALLVIHQLFQVPIYEEEQTLLR |
| 2HOE Chain:A ((22-378)) | ----------------ISRILKRIM-KSPVSRVELAEELGLTKTTVGEIAKIFLEKGIVVEEKDSP-----RPTKSLKISPNCAYVLGIEVTRDEIAACLIDASMNILAHEAHPLPSQSDREETLNVMYRIIDRAKDMMEKLGSKLSALTVAAPGPIDTER-GIIIDPRNFPLSQIPLANLLKEKY-GIEVWVENDADMGAVGEKWYTK--RDDSFAWILTGKGIGAGIIIDGELYRGENGYAGEIGYTRVFNGN------EYVFLEDVCNENVVLKHVLS------------MGFS-LAEARDSGDVRVKEYFDDIARYFSIGLLNLIHLFGISKIVIGGFFKELGENFLKKIKIEVETHLLY-K-HSVDMSFSKVQEPVIAFGAAVHALENYLERVT--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HOE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -230804 for 2863 contacts (-80.6/contact) +
2D Compatibility (PS) -37439 + (NN) -15150 + (LL) 1716
1D Compatibility (HY) -22400 + (ID) 3550
Total energy: -307627.0 ( -107.45 by residue)
QMean score : 0.412
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