Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTEKSGSPKWQLFKNILTYTIICLGGIIMLMPFVWMVSTAFKTGAANMVLPPQFIPKEPTTANFTQVF-EMFP----MLRFLVNSVIVAVVTTLGQMLFCSMAAYAFARIPFWGRDKLFLLYLATMMVPAQVTMIPQFILMKQ-FGWLD-------------------SYAGLIVPALF-S-VFGTFLLRQAFMGIPKELEEAAFMDGANHFTIFRKVILPLAKPTFATLGILTFMQSWNSYLWPLIVTS-SQE----------MATLPLGLSLLQGR--YGTNYGLMMAGVLISVIPILAVYLFAQKYFIQGMAMSGMKE |
| 3RLF Chain:F ((258-503)) | ----------------------------------------------------------TTGWKNFTRVFTDE-GIQKPFLAIFVWTVVFSLITVFLTVAVGMVLACLVQWEALRGKAVYRVLLILPYAVPSFISILIFKGLFNQSFGEINMMLSALFGVKPAWFSDPTTARTMLIIVNTWLGYPYMMILCMGLLKAIPDDLYEASAMDGAGPFQNFFKITLPLLIKPLTPLMIASFAFNFNNFVLIQLLTNGGPDRLGTTTPAGYTDLLVNYTYRIAFEGGGGQDFGLAAAIATLIFLLVGALAI----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RLF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -144334 for 1372 contacts (-105.2/contact) +
2D Compatibility (PS) -21678 + (NN) -9039 + (LL) 6200
1D Compatibility (HY) -16000 + (ID) 2350
Total energy: -187201.0 ( -136.44 by residue)
QMean score : 0.297
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