Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKFTKLMQGYLHLIEGKNEKIKPILLETKPNFTTDSVLETASWLWLSSKINHYDREEVEPVIAFLVENWNRPEKSIWGSAENDIYLATISSVYSALLDVKNTFPKPELQQTITIIRDYCFDNLLKGDSILTGFNTRKVSTDQLLSVLPFGLFSPEDLVMVAAVGKMEQQLVQDDGVLPYSGAPRVNSFATALMALYFLEKSDQDKALHYLNMAMKMEDNDELGAIFIEINQAFRAMESEVTAHISHDPFGHENRYEQQLTERTPHYPETEMHFSAACEVISEVEPIQVELVLKEKDWTILCEKKEKNDVQIWEALVPPLEEVGEYTYYFQATMKDQTTLTSDDYKVEPIWKHWSEEAAICETEQGLMVLFKENPSSIIPVEFTVKS-DELVIGLKPSFEA-----S-N----------VKT-KSSGQLKKDDLEIIVSNNPV-RLEVHFKGKLILESHKIYPALQWYTDKTGTINKVKLHLDAPKEEEYYGFGERYNALGQRGNVLDCFVYNQYRDQGTRTYIPMPFYHTNRDYSVFVDTARYTSFDLGNQLADKHTITVEINGCDTDICLLMG-DIRSAVANYMKKTGKPAMVPVWALGPWMSSNNWD--RESVVRNEVETTQELQIPSTVVVLE-QWSDEATYYMFNDAEYDEKAPSEAYSYDEIRFPSWGRWPDPKGMVDYIHDNKMKLILWQIPIQKYLNRQQHPLKDREEAYMIEKGYVVKNPDGSPYRIPENWFTESLIMDFSNEEGKKWWFDKRQYLIDIGVDGFKTDGGEFVFGEGLQFADGRRGDEMRNLYPNDYVEAYYQFAQQ----NEGMTFSRAGYTGAQNFPAHWAGDERSTFDAFRRSLIAGLSAGFSGIPFWSFDFAGFNGDIPTAELFIRSAEMATFCPIMQYHAESKAEFNQDRTPWNIASRTGDDSVIPIYRHFANVRMNILPYIYNESLKCVETGLPMMRALLLDYKEDPRVSDMYDQYLFGEAMLIAPVIEDGVRSREVYLPEGTWYDFWNGTKVSGPTLRKCKADKEEIPVFVRGGKAVLCNVDATLKLGSWVGNTVEEYDTPLLKVYLDGD---FTEEITDHLFGKW-LVKVTENADEVIVSVQTNTASYEVEVIGTTKKVQIKKGR |
| 2F2H Chain:A ((53-740)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FTLRFFSPQEGIVGVRIEHFQGALNNGPHYPLNILQDVKVTIENTERYAEFKSGNLSARVSKGEFWSLDFLRNGERITGSQVKNNGYV--QDTNNQRNYMFERLDLGVGETVYGLGERFTALVRNGQTVETWNRDGG-TSTEQAYKNIPFYMTNRGYGVLVNHPQCVSFEVGSEKVS--KVQFSVESEYLEYFVIDGPTPKAVLDRYTRFTGRPALPPAWSFGLWLTTSFTTNYDEATVNSFIDGMAERNLPLHVFHFDCFWMKA--------------FQWCDFEWDP------LTFPDPEGMIRRLKAKGLKICVWINPYIGQK----SPV----FKELQEKGYLLKRPDGSLWQW-DKWQPGLAIYDFTNPDACKWYADKLKGLVAMGVDCFKTDFGERIPT-DVQWFDGSDPQKMHNHYAYIYNELVWNVLKDTVGEEEAVLFARSASVGAQKFPVHWGGDCYANYESMAESLRGGLSIGLSGFGFWSHDIGGFENT-APAHVYKRWCAFGLLSSHSRLHGSK-----SYRVPWAYDD-----ESCDVVRFFTQLKCRMMPYLYREAARANARGTPMMRAMMMEFPDDPACDYLDRQYMLGDNVMVAPVFTEA-GDVQFYLPEGRWTHLWHNDELDGSRWHKQQHGFLSLPVYVRDNTLLALGNNDQRP-DY------VWHEGTAFHLFNLQDGHEAVCEVPAADGSVIFTLKAARTGNTITVTGAGEAKNWTLCLRN----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2F2H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -256498 for 5841 contacts (-43.9/contact) +
2D Compatibility (PS) -70807 + (NN) -25055 + (LL) 32764
1D Compatibility (HY) -38400 + (ID) 8350
Total energy: -366346.0 ( -62.72 by residue)
QMean score : 0.449
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