Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LLFDTHVHLNDEAFDDDIEEVIKRAQENDVTRMAVVGFNKETIDRALELAEKYDFISLIVGWHPTDAITFTDEDLEWLRDLALTHPKVVALGEMGLDYHWDTSPKETQFEVFRKQIRLAKEVNLPIVIHNREAT-EDVVRILQEEHAEE-VGGIMHCFGETVEVMEACLAM-NFYISFGGTVTFKNAKLPKIAAQAIPIDRLLIETDAPYLAPTPNRGKRNEPGYVKLVAEKIAELKEMKYSEIATHSTENAKRLFRIKD
2GZX Chain:A ((2-254))
-LIDTHVHLNDEQYDDDLSEVITRAREAGVDRMFVVGFNKSTIERAMKLIDEYDFLYGIIGWHPVDAIDFTEEHLEWIESLA-QHPKVIGIGEMGLDYHWDKSPADVQKEVFRKQIALAKRLKLPIIIHNREATQDCIDILLEEH--AEEVGGIMHSFSGSPEIADIVTNKLNFYISLGGPVTFKNAKQPKEVAKHVSMERLLVETDAPYLSPHPYRGKRNEPARVTLVAEQIAELKGLSYEEVCEQTTKNAEKLFN---
General information:
TITO was launched using:
RESULT:
Template:
2GZX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -163119 for 2213 contacts (-73.7/contact) +
2D Compatibility (PS) -27534 + (NN) -17667 + (LL) 732
1D Compatibility (HY) -26000 + (ID) 7650
Total energy: -241238.0 ( -109.01 by residue)
QMean score : 0.568
(partial model without unconserved sides chains):
PDB file :
Tito_2GZX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GZX-query.scw
PDB file :
Tito_Scwrl_2GZX.pdb
: