Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKWVKWLIVIVIIAVVAVGAVFLLSKNSGSVTQEKLVTAKVKQGDMKINATGTGAISPV-NTQVPD---YDELQLVAQMDELDIPNIKKDQEVKVTVTALPDKTYTGKVKEIAEQGQVQNGVSSFSVIIS-LDKTDDLKAGMTADASILVNEKKDALYVPIEAVQKDSDDKYYVLVPEEKDNGKTKKVKKFVETGLHNEDNIEITKGVKKGEKVILPTQETSTVPGAPS |
| 3LNN Chain:A ((178-350)) | -------------------------------------------NGRVVDLNAATGAYWNDTTASLMTVADLSHVFVTANAQEKDLGHVYVGQSATVKFDAYD-DPQPGKVRYVGQILDADTR--TTKVRMVFDNPDGRLRPGMFAQATFLSQP-HEGIVVPMSAIVQS-GFYTRAFV----EVAPWQFEPRVIKLGAQIGDRMEVKSGLSAGDRVVVKEGVLLND----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LNN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -26512 for 967 contacts (-27.4/contact) +
2D Compatibility (PS) -18008 + (NN) -2594 + (LL) 4856
1D Compatibility (HY) -6400 + (ID) 1500
Total energy: -50158.0 ( -51.87 by residue)
QMean score : 0.392
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