Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNVLQSMKMAWKQLKASKLRSFLTMLGIIIGVASVILLVSLGNGVTQEVDDQMGDLGSNLITVVNSSVNPNDKYTY-DEVMKYQNIDGVKSVSPELSGQVNATFDYKNSSNKVIGTNDQYKAARSLEMKEGRFLLPIDTEYGQKVAVIG--STVASDLFGFGDPIGETIR-------LNGMPYKVVGVLKEKGASMMGSSDDQIFIPISSAQRLLKDTNVRTIYVETKSAEDVDFVVNTLESRLAIKFGDEKEQEKNASSAQMGPSYQVINQQEILNAFN-TISTTLTTALGAIAAISLVVGGIGIMNIMLVSVSERTREIGIRKALGAKKRA---ILLQFLIESIVISVCGGVIGIIIGVSGALIFGSVAGISSGITAGTIIFSFVFSLCIGVIFGIAPANKASKLRPIDALRSE |
| 4NTC Chain:A ((2-326)) | MSIGKLLS-----------NGALLVDVLIIGAGPAGL--STATGLARQLHT---------AVVFDSGVYRNAKTQHMHNVLGWDHRN-PAELRAAGRADLTTRYSTIQFQNSTIEAIRQVETNQLFEARDN----EGHSWYGRKVVLATGVRDIPLDIEGYSECWANGIYHCLFCDGYEERGQETVGVLALG--------------PIANPARALHLARMAL-----RLSESVTIYTNG-NEQLAKEIQQAAEESPV------GASGLKFEARPIRRFEKGDVAKTVIVHLGE---------SESKTEGFLVYNPQTEVNGPFAKQLALNMTEGGDILTTPPFYET-------------SVPGVFAVGDCATPLKAVTPAVSMGSLAAGGLVAQLQAQAL---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NTC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -138470 for 2568 contacts (-53.9/contact) +
2D Compatibility (PS) -32068 + (NN) 2357 + (LL) 7472
1D Compatibility (HY) -6800 + (ID) 2900
Total energy: -170409.0 ( -66.36 by residue)
QMean score : 0.170
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