Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKFKKVVLGMCLIASVLVFPVTIKANACCDEYLQTPAAPHDIDSKLPHKLSWSADNPTNTDVNTHYWLFKQAEKILAKDVNHMRANLMNELKK--FDKQIAQGIYDADHKNPYYD-TSTFLSHFYNPDRDNTYLPG---F--------ANAKITGAKYFNQSVTDYR--EGKFDTA-FYKLGLAIHYYTDISQPMHANNFTAIS----------YPPGYHCAYENYVDTIKHN--YQ---------ATED---MVA-------KR--FCSDDVKDWLYENAKRAKA-DYPKIVNAKTKKSYLVGNSEWKKDTVEPTGARLRDSQQTLAGFLEFWSKKTNE |
| 3SNG Chain:A ((5-267)) | ---------------------------------------------------------------GHVMTCRIAQGLLNDEAAH----AVKMLLPEYVNGDLSALCVWPDQVRHWYKYKWTSPLHFIDTPDKACNFDYERDCHDQHGVKDMCVAGAIQNFTTQLSH-YREGTSDRRYNMTEALLFLSHFMGDIHQPMHVGFTSDAGGNSIDLRWFRHKSNLHHVWDREIILTAAKDYYAKDINLLEEDIEGNFTDGIWSDDLASWRECGNVFSCVNKFATESINIACKWGYKGVE-AGETL-----SDDYFNSRLPIVMKRVAQGGIRLAMLLNNVFGA--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SNG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -14800 for 1638 contacts (-9.0/contact) +
2D Compatibility (PS) -21778 + (NN) -2536 + (LL) 4552
1D Compatibility (HY) -6800 + (ID) 1600
Total energy: -42962.0 ( -26.23 by residue)
QMean score : 0.198
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