Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MITFDQLDTELQALENPNTIKIFRNHGCPDSLDLYGLKIGDLKKIIRREKLTKNHELAVKLIESNNSDLIYLGLLAINPNKITTEQIEKWNIAFRETWSQLTFGLASIVSKRDDALLFAKTWIESDYDLTKSMGWQIYSEHINNLPEAETLLQRAKETLQTETNRTRYSMNGFIITCGIYKDDLHEKAMEAAKSVGKVHVNLGNTACKVPDAISYIEKARNRTK |
| 3LTJ Chain:A ((114-171)) | -------------------------------------------------------------------------------------------------------------------VEPLIKALKDEDWFVRIAAAFALGEIGD-----ERAVEPLIKALKDEDGWVRQSAADALGEIG---------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LTJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -16340 for 416 contacts (-39.3/contact) +
2D Compatibility (PS) -5948 + (NN) 434 + (LL) 11576
1D Compatibility (HY) 2000 + (ID) 350
Total energy: -8628.0 ( -20.74 by residue)
QMean score : 0.292
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