Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLTWVIRVCFLILGGTTGVFSLPALWVKLGIGHILLINNPYTDALIGALIFYLITFWAVKYVEAALNWLEEKLAKIAIATLVYGGLGLFVGLVIAFFASNALSQTNIPLLNSVVPVILTLVLGYLGFRIGISRRNEFGNFVNNRNAKKRTPEEEKTEEKSKKTYKILDTSVIIDGRIADILTTGFLDGTVVIPLFVLAELQHIADSSDTLKRTRGRRGLDILNRIQKEDAIQVEMYEGDFEDTPEVDSKLVKLAKVMGGIVVTNDYNLNKVCEFQNVPVLNINDLANAVKPVVLPGEKMTVLMVKDGKEHNQGVAYLDDGTMIVVEDGRKFINETIQVEVTSVLQTSAGRMIFAKPS |
| 1YVC Chain:A ((8-60)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MKNVPVEAGKEYEVTIEDMG-KGGDGIAR-IDGFVVFVPNA--EKGSVINVKVTAVK------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YVC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -27215 for 301 contacts (-90.4/contact) +
2D Compatibility (PS) -5673 + (NN) -530 + (LL) 23300
1D Compatibility (HY) -1600 + (ID) 700
Total energy: -12418.0 ( -41.26 by residue)
QMean score : 0.536
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