Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEQILLVDGYNVIGAWPELSYLKDRDLEAARDKLVEWMAEYQSYTGYRVVVVFDAQF-VRG-----VK-------R-----------KS--KKYQVEVVFTHEDETADEYIEQKAIEWKNVRTQIMVATSDYTEQWAIFGQGALRISSRELLFEIQEMSKQIGKKIKRIQEEMPKSNLNLDSDVISQLEKWRRGEE
3ZDB Chain:A ((3-134))
-VHLLIVDALNLIRRIHAVQGS--PCVETCQHALDQLIM---HSQPTHAVAVFDD--SSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWST-SGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLL----------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3ZDB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36671 for 691 contacts (-53.1/contact) +
2D Compatibility (PS) -11363 + (NN) -5623 + (LL) 5268
1D Compatibility (HY) -2800 + (ID) 900
Total energy: -52089.0 ( -75.38 by residue)
QMean score : 0.518
(partial model without unconserved sides chains):
PDB file :
Tito_3ZDB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZDB-query.scw
PDB file :
Tito_Scwrl_3ZDB.pdb
: