Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEKNWYVVHTYSGYENKVKANLEKRVESMGMSDKIFRVIVPEEEETEVKNGKTKTIKRKVFPGYVLVEIVMTDDSWYVVRNTPGVTGFVGSAGSGSKPTPLLPEEADRILKSMGMVEKRAEADFEIGETVMVKEGPFADFSGKVDEMDNDKGKAKVMVNMFGRETPVEVDFNQIEKL
2OUG Chain:A ((2-156))
--QSWYLLYCKRGQLQRAQEHLERQA---------VNCLAPMITLEKIVRGKRTAVSEPLFPNYLFVEFDPEVIHTTTINATRGVSHFVRFGA---SPAIVPSAVIHQLSVYK---------------KVIITEGAFEGFQAIFTEPDGEA-RSMLLLNLINKEIKHSVKN------
General information:
TITO was launched using:
RESULT:
Template:
2OUG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36789 for 1000 contacts (-36.8/contact) +
2D Compatibility (PS) -15419 + (NN) -7120 + (LL) 2168
1D Compatibility (HY) -7600 + (ID) 1450
Total energy: -66210.0 ( -66.21 by residue)
QMean score : 0.299
(partial model without unconserved sides chains):
PDB file :
Tito_2OUG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OUG-query.scw
PDB file :
Tito_Scwrl_2OUG.pdb
: