Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALNIEEIIASVKEASVLELNDLVKAIEEEFGVTAAAPVAVAAAGGAAAEQTEFTVELASAGDSKIKVIKVVREITGLGLKEAKELVDNAPKALKEGIAKDEAEEIKAKLEEVGANVEVK
1CTF Chain:A ((7-74))
----------------------------------------------------EFDVILKAAGANKVAVIKAVRGATGLGLKEAKDLVESAPAALKEGVSKDDAEALKKALEEAGAEVEVK
General information:
TITO was launched using:
RESULT:
Template:
1CTF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33282 for 496 contacts (-67.1/contact) +
2D Compatibility (PS) -7620 + (NN) -3314 + (LL) 5264
1D Compatibility (HY) -5600 + (ID) 2200
Total energy: -46752.0 ( -94.26 by residue)
QMean score : 0.747
(partial model without unconserved sides chains):
PDB file :
Tito_1CTF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1CTF-query.scw
PDB file :
Tito_Scwrl_1CTF.pdb
: