Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDEKEKNLNENSENESTPKREVEDTLHTPESAQPVQETPIVEGVTPEGEKFAGATEDAAEASSTNAFFEEASNKESEPARPAPGPRRAGTTGGGAVPPNRVNNGGSGNGNGEPPKRGKHFIGYFLTALIGVIIGGLIIFFVAWDNGDNADTTSNSNNKATKVEKVSVDTTSDVTKAVDKVQDAVVSVLNYQSSSSLDGTTTSEQEASSGSGVIYKKANGKAYIVTNNHVVADANKLEVTFTNGKKSEAKLLGTDEWNDLAVLEIDDKNVTTVAAFGDSDSLKLGEPAIAIGSPLGTEFSG--SVTQGIISGLNRAVPVDTNGDGTEDWEADVIQTDAAINPGNSGGALINIEGQVIGINSMKISME--NVEGISFAIPSNTVEPIIEQLETKGEVERPSLGVSLRDVDTIPETQQKNILKLPDSVDYGAMVQQVVSGSAADKAGLKQYDVIVELNGQKVTNSMTLRKILYGNDVKIGDKVKVKYYRDGKEKS-----TDIKLEAAKTTT |
| 3PV3 Chain:B ((77-354)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SIGSGVIIDPNNG--VIITNDHVIRNASLITVTLQDGRRLKARLIGGDSETDLAVLKIDAKNLKSL-VIGDSDKLEVGDFVVAIGNPFGL----SQSATFGIVSALKRS---DLN----ENF----IQTDAAINPGNAGGALVNAKGELIGINTAILSPYGGNV-GIGFAIPINMVKDVAQQIIKFGSIHRGLMGIFVQHLT--PELAQA--MGYPEDFQ-GALVSQVNPNSPAELAGLKAGDIITQINDTKITQATQVKTTI--SLLRVGSTVKIIVERDNKPLTLSAVVTDIK-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PV3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -82044 for 2035 contacts (-40.3/contact) +
2D Compatibility (PS) -27916 + (NN) -4352 + (LL) 9416
1D Compatibility (HY) -22400 + (ID) 5850
Total energy: -133146.0 ( -65.43 by residue)
QMean score : 0.560
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