Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTNTLKTSYQKTPYKLGGNGPRNVGVLTEALQNIDDNLESDIYGNGAVIEDFETKIAKILGKQSAVFFPSGTMAQQIALRIWADRKENRRVAYHPLSHLEIHEQDGLKELQQITPLLLGTANQLLTIDDIKSL-R------EPVSSVLIELPQREIGGQLPAFEELEKISEYCHEQGISLHLDGARLWEITPFYQKSAEEICALFDSVYVSFYKGIGGIAGAILAGNDDFVQEAKIWKRRYGGDLISLYPYILSADYYFEKRIGKMAEYFEAAKGLAERFNSCSGVKTVPEVPVSNMFHVYFENSADEIGAILTKIQDETGVGISGYLQEKSADVCAFEVSVGDAFAEIPAKNLELVFRCLEKEL |
1JG8 Chain:A ((16-341)) | ----------------------PTEEMRKAMAQA--EVGDDVYGEDPTINELERLAAETFGKEAALFVPSGTMGNQVSIMAHTQ-RG-DEVILEADSHIFWYEVGAMAVLSGVMPHPVPGKNGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYAGYADSVMFCLSKGLCAPVGSVVVGDRDFIERARKARKMLGGGMRQAGVLAAAGIIALTKMVDRLKEDHENARFLALKLKEI-GYSVNPEDVKTNMVILRTDNLKVNAHGFI-EALRNSGVLANAVS------DTEIRLVTHKDVSRNDIEEALNIFEK----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JG8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -221712 for 2858 contacts (-77.6/contact) +
2D Compatibility (PS) -34701 + (NN) -13680 + (LL) 1224
1D Compatibility (HY) -7200 + (ID) 3500
Total energy: -279569.0 ( -97.82 by residue)
QMean score : 0.526
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